Plant GARDEN How To ▶︎

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Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936378.1_cds_XP_016481987.1_73262

CDS Infomation

[gene=LOC107802922] [db_xref=GeneID:107802922] [protein=endoribonuclease Dicer homolog 2-like] [protein_id=XP_016481987.1] [location=complement(join(4195..4545,4974..5252,5817..6227,6685..6894,7061..7257,7369..7472,7562..7995,8081..8352,8427..8656,8759..8977,9249..9409,9491..9686,10257..10356,10748..10877,10962..11090,11437..11577,11911..11972,12084..12168,12716..12850,13605..13718,13971..14148,14265..14335))] [gbkey=CDS]

Sequence

ATGGAGCCAGCTGAAGTTACAGTCTCTGAAAACCAACAGCTCTGCCCTGACTCTCTGCCT
TTTGCAAGAAGTTATCAGTTAGAGGCATTGGAGACGGCATTAAAGCGGAACACTATTGTT
TATTTGGAGACTGGTTCTGGAAAGACCCTTATTGCTATTATGCTTTTGAGAAGCTATGCT
TATCTTCTTCGAAAGCCTTCTCCATACATAGCTGTTTTCTTGGTCCCGACGGTTGTTCTG
GTGGCTCAGCAAGGAGATGCTCTCATCATGCATACCGACTTGAAAGTGGGCAAGTATTGG
GGAGAAATGGGTGTCGATTATTGGGATGCTGCTACATGGCAAAAACAGGTGGACGATCAT
GAGGTCCTCGTAATGACACCCGCAATACTACTTGCTGCTTTGAGGCATAGTTTCTTAAAA
ATTGAAATGATCAAAGTTCTAATATTTGATGAATGTCACAATGCAAGAGGCAAACACCCT
TATGCCTGCATAATGAAGGAATTTTATCATCGTCAATTCACCCTTGAAAGCGCACAACTT
CCAAGAATATTCGGAATGACTGCTTCCCCTATAAAGACTAAAGGTTCTAGCGCGGAATTT
ACTTGGGAAATGATTCGTGACCTCGAGAATCTTATGCATTCCAAGGTATACACATGTGTC
AGTGAATCTGTTTTGGCAGAGTATATCCCATTCTCAACTCCGAAGCTGAAGATATATCAA
CATGTGGATATTCCGTGCACATTGTTTGTTAGTTTAGTTTCTGACCTGATAAAGTTGAAA
GACAAGTATGAAGATTTGATTTCAAAGTCAAGCCTATCTGATTTAAGTGCTGGTTCTGCA
AGAAAAAGATTGTCAAAACTATATTCGTCCTTCATATTTTGTTTGAGTGAGCTGGGTGTT
TGGCTGACTTTCAAGGCAGCCGAGTTCTTGTCCTCTGAAGAAACCGACTTCTTTTCATGG
GGAGAATTAGATGTTTGTGCTCAAACGATTGTTAGAAATTTCAGTTTGGGTGCATCTAAG
GTTTTCTCGGCTCGCATACCATCTGGTTCACATTGGTCACTTGGTGGTGATATTCATGCA
AATGTTGATGCTGGATATTTGACATCCAAAGTTAATAGTCTTATAGAGTCTCTTCTTGAG
TACAGAGACCTGAAGGATTTGAGATGCATCATATTTGTTGAGAGAATCATTACAGCTATT
GTTCTTCGGTCTTTGTTAAATGAGTTGCTTCCGGAATTAAGTGGTTGGAAAACTGAGTAC
ACAGCAGGACATAGTTCTATGCTGCAGTCACAGAGTAGAAATGTTCAAAATAAAATTGTT
GAAGAATTTCGCAAGGGTGTGGTCAACATTATTGTAGCGACTTCTATTCTTGAAGAGGGC
TTGGATGTTCAAAGTTGCAACCTTGTCATTCGATTTGATCCCTCAGCAACCGTTTGTAGC
TTTATACAGTCTCGTGGTCGAGCTCGAAAGCAGAACTCACACTTTATTCTGATGGTTGGG
AGCGGGGATGCATCAACTCTTACTCGCATGCAAAATTATATGCAAAGTGGGGAGATCATG
CGGCAAGAATCATTACGCCATGCTTCTATTCCGTGTTCACCTCTTGATGATGAATTGCAA
AATGAATTGCACTATAAAGTTGAAACAACTGGAGCAGTTGTCACCCTCAGTTCTAGCGTG
TCATTGTTATACTTCTATTGCTCAAGGCTATCTTCGGATGGGTACTATAAACCCAGTCCT
AGGTTTGTTATTGAGAAGGAAACAGAAACCTGCACCCTACATCTTCCCAAAAATTGCCCA
CTGCAAAAAGTTATTAGTGTGAAAGGGAATACCAAAATATTGAAGCAACTTGCTTGCCTC
GAAGCTTGTAAAGAACTTCATCGTGAGGGTGCCTTGACCGACAATCTTGTTCCTGATATC
GTGGAGGAAGAAGCCATCATCAAAGAATTGGGATGTCAAATCTCTACCGATGAAGAATCA
AAGTACTTTCCACCAGAATTGGTTAGTCATTGTGCCAATGATACGGAAACAGTGTACTAC
TGCTACGTAGTTGATTTGCAACATGACTCTTACAGCAGTTACCAGCTTCGTGGGATAGTA
CTTGCTGTTAGGACAAGGCTCAAGTTTGACGATGAAAGACTGACTTTTGACTTGGATGTT
GATAAGGGAAGCTTGCTAGTTCAAGTAAATTATAGTGGAGTTGTTAGACTTACTTCTGAA
GAGATTTTACGATGTCAGAGGTTTCAAGTCAGTCTATTCAGAATTCTTCTTGACCGCGAT
CTGAGTAAACTGCAGGACGCTTTGGCTGCAGTTCAACTGCCTGTTGGTTCTGCAGTTTCT
GATTATCTTTTGCTTCCATCTTTGGGTTCAACTCAAAACCCTCAAATAAATTGGGAATGT
GTGAATTCTGTGCTATTTCCTTCTCTAGTTCTTGGGGATAAGCATATTGATTGTTGTTCT
ACGCAAGGTTGCAAACGCAGTGTGAACACCAAAACTGGGGTGGTATGCAGCTGCATGTTG
GAGAACTCATTGGTCTGTACGCCTCATAATGGCTATTTGTACTGCGTTACCGGTTTCTTG
GATAATTTGGATTGCAACTCATTGCTGGAACAGAGAACTGGAGAATCCGTTACCTACAAA
GAATACTACAAAAAGCGGCATGGGATCAACTTATGCTTTGAAGGAGAACCACTTCTTAGG
GGGAAACGCATTTTCAAAGTACACAATTACCTTCAAAGATGTAGAAGTCAGAAGGCTAAA
GATTCAACTGATTCATCTGTTGAATTGCCTCCTGAACTTTGTTCCATCATCATGTCACCT
GTCTCTATTTCTACCCTTTATACCTATTCATATCTTCCTTCGGTCATGCATCGGGTTGAG
TCCTTGATTATGGCTTCAAACTTGAAAAGGATGCACTCAGATCAGTGCACTCAAAACATT
TTTATTCCAACTGCTAAGGTTCTGGAAGCAATTACAACAAAGAAATGCGTCGAGAAGTTT
CATTTGGAATCACTTGAGACACTTGGAGACTCTTTTCTCAAATATGCTGCGAGTATACAG
CTGTTCAAGACTTATGAAAATCATCACGAGGGTCTACTCACTGTGAAGAAAAACAAAATT
ATTTCCAATGCTGCATTGTGCAAGCTTGGATGTGCTCGTAAAATACCGGGATTCATTCGT
AATGAACCATTCGATCTTAAAGGGTGGCTCATTCCTGGTGATAATTCCCAAGTTCACAAT
TTCGATGAAGAAGTGCTGATGCCTTCAGTAAAAATGTATAGTAGGGGAAGGCAGAAGATG
AAAAGTAAGAGGGTAGCTGATGTTGTTGAGGCACTGATAGGTGCCTTCCTCAGCTCAGGC
GGGGAAGTAGCGGCTTTGTCATTTATGAAATGGCTTGGGATCGGCATTGATTTTGTAGAT
GCACCTTCGCCGAGGCACTTCCCTATGAATGCTGAGAAGCTAGTTAATGTCAGATACTTG
GAATCACTGCTACATTACAAGTTCCATGATCCTTCTCTGCTTGTAGAGGCTCTAACTCAC
GGATCTTACATGCTACCTGAGATTCCACGATGCTATCAGCGATTGGAATTTCTTGGAGAT
GCAGTGCTAGATTATGCTGTTACAGCGCATCTGTATTTCAAATATCCGGGACTGTCTCCA
GGACTCATTACTGATTTGAGGTCTGCCTCCGTAAATAATGAATGCTACGCTCAAGCTGCT
GTTAGGGCTGGCCTACACAAGCACATTCTTCATGCTTCACAGGATCTGCAGAGACAGATA
GTTAATACTGTTCTGAATTTTGAGAAACTGGATCCGGTGTCCACTTTCGGATGGGAGTCC
GAAACTACTTTTCCAAAGGTGCTTGGAGATGTTATTGAGTCTCTTGCCGGGGCGATCTTT
GTTGATTCTGGCTTCAACAAAGATATTGTGTTTCAGAGCGTACGAACACTTCTGGAACCG
TTGATTACACCGGATACAGTAAAGCTCCATCCAGTCAGAGAGTTGAGTGAACTATGTGAC
CAGAAAGGTTATATAAAGAAGAAGAATGTTGTCTCACGTGTGAATGGCGTGGCGTATATT
ACAGTAGAGGTTGAAGCTGACGGTGTTAGTCACAAGTTCACGTGCTCGGAACGAGACAAA
AAAATGGCCGAGAAGGTGGCCTGCAAAAATGTACTCAAATTGCTGAAGGAATGTGCATCT
GATGCTTAG

Peptide Sequence

PEP ID

XP_016481987.1

PEP Infomation

PREDICTED: endoribonuclease Dicer homolog 2-like [Nicotiana tabacum]

Sequence

MEPAEVTVSENQQLCPDSLPFARSYQLEALETALKRNTIVYLETGSGKTLIAIMLLRSYA
YLLRKPSPYIAVFLVPTVVLVAQQGDALIMHTDLKVGKYWGEMGVDYWDAATWQKQVDDH
EVLVMTPAILLAALRHSFLKIEMIKVLIFDECHNARGKHPYACIMKEFYHRQFTLESAQL
PRIFGMTASPIKTKGSSAEFTWEMIRDLENLMHSKVYTCVSESVLAEYIPFSTPKLKIYQ
HVDIPCTLFVSLVSDLIKLKDKYEDLISKSSLSDLSAGSARKRLSKLYSSFIFCLSELGV
WLTFKAAEFLSSEETDFFSWGELDVCAQTIVRNFSLGASKVFSARIPSGSHWSLGGDIHA
NVDAGYLTSKVNSLIESLLEYRDLKDLRCIIFVERIITAIVLRSLLNELLPELSGWKTEY
TAGHSSMLQSQSRNVQNKIVEEFRKGVVNIIVATSILEEGLDVQSCNLVIRFDPSATVCS
FIQSRGRARKQNSHFILMVGSGDASTLTRMQNYMQSGEIMRQESLRHASIPCSPLDDELQ
NELHYKVETTGAVVTLSSSVSLLYFYCSRLSSDGYYKPSPRFVIEKETETCTLHLPKNCP
LQKVISVKGNTKILKQLACLEACKELHREGALTDNLVPDIVEEEAIIKELGCQISTDEES
KYFPPELVSHCANDTETVYYCYVVDLQHDSYSSYQLRGIVLAVRTRLKFDDERLTFDLDV
DKGSLLVQVNYSGVVRLTSEEILRCQRFQVSLFRILLDRDLSKLQDALAAVQLPVGSAVS
DYLLLPSLGSTQNPQINWECVNSVLFPSLVLGDKHIDCCSTQGCKRSVNTKTGVVCSCML
ENSLVCTPHNGYLYCVTGFLDNLDCNSLLEQRTGESVTYKEYYKKRHGINLCFEGEPLLR
GKRIFKVHNYLQRCRSQKAKDSTDSSVELPPELCSIIMSPVSISTLYTYSYLPSVMHRVE
SLIMASNLKRMHSDQCTQNIFIPTAKVLEAITTKKCVEKFHLESLETLGDSFLKYAASIQ
LFKTYENHHEGLLTVKKNKIISNAALCKLGCARKIPGFIRNEPFDLKGWLIPGDNSQVHN
FDEEVLMPSVKMYSRGRQKMKSKRVADVVEALIGAFLSSGGEVAALSFMKWLGIGIDFVD
APSPRHFPMNAEKLVNVRYLESLLHYKFHDPSLLVEALTHGSYMLPEIPRCYQRLEFLGD
AVLDYAVTAHLYFKYPGLSPGLITDLRSASVNNECYAQAAVRAGLHKHILHASQDLQRQI
VNTVLNFEKLDPVSTFGWESETTFPKVLGDVIESLAGAIFVDSGFNKDIVFQSVRTLLEP
LITPDTVKLHPVRELSELCDQKGYIKKKNVVSRVNGVAYITVEVEADGVSHKFTCSERDK
KMAEKVACKNVLKLLKECASDA

Transcript Sequence

Gene sequence data has not been registered.